Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG23795.1 | OJG27865.1 | RU98_GL001807 | RU98_GL002074 | Iron-dependent repressor. | Zinc transporter ZupT. | 0.422 |
OJG25263.1 | OJG27070.1 | RU98_GL001088 | RU98_GL002850 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Heavy metal translocating P-type ATPase. | 0.638 |
OJG25263.1 | OJG27865.1 | RU98_GL001088 | RU98_GL002074 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Zinc transporter ZupT. | 0.542 |
OJG25918.1 | OJG27070.1 | RU98_GL000795 | RU98_GL002850 | Hypothetical protein. | Heavy metal translocating P-type ATPase. | 0.470 |
OJG25918.1 | OJG27865.1 | RU98_GL000795 | RU98_GL002074 | Hypothetical protein. | Zinc transporter ZupT. | 0.458 |
OJG25918.1 | ychF | RU98_GL000795 | RU98_GL001846 | Hypothetical protein. | GTP-dependent nucleic acid-binding protein engD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.664 |
OJG27070.1 | OJG25263.1 | RU98_GL002850 | RU98_GL001088 | Heavy metal translocating P-type ATPase. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.638 |
OJG27070.1 | OJG25918.1 | RU98_GL002850 | RU98_GL000795 | Heavy metal translocating P-type ATPase. | Hypothetical protein. | 0.470 |
OJG27070.1 | OJG27346.1 | RU98_GL002850 | RU98_GL002798 | Heavy metal translocating P-type ATPase. | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.503 |
OJG27070.1 | OJG27865.1 | RU98_GL002850 | RU98_GL002074 | Heavy metal translocating P-type ATPase. | Zinc transporter ZupT. | 0.444 |
OJG27346.1 | OJG27070.1 | RU98_GL002798 | RU98_GL002850 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Heavy metal translocating P-type ATPase. | 0.503 |
OJG27346.1 | OJG27865.1 | RU98_GL002798 | RU98_GL002074 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Zinc transporter ZupT. | 0.412 |
OJG27865.1 | OJG23795.1 | RU98_GL002074 | RU98_GL001807 | Zinc transporter ZupT. | Iron-dependent repressor. | 0.422 |
OJG27865.1 | OJG25263.1 | RU98_GL002074 | RU98_GL001088 | Zinc transporter ZupT. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.542 |
OJG27865.1 | OJG25918.1 | RU98_GL002074 | RU98_GL000795 | Zinc transporter ZupT. | Hypothetical protein. | 0.458 |
OJG27865.1 | OJG27070.1 | RU98_GL002074 | RU98_GL002850 | Zinc transporter ZupT. | Heavy metal translocating P-type ATPase. | 0.444 |
OJG27865.1 | OJG27346.1 | RU98_GL002074 | RU98_GL002798 | Zinc transporter ZupT. | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.412 |
OJG27865.1 | OJG27866.1 | RU98_GL002074 | RU98_GL002075 | Zinc transporter ZupT. | Pyruvate oxidase; Belongs to the TPP enzyme family. | 0.574 |
OJG27865.1 | ychF | RU98_GL002074 | RU98_GL001846 | Zinc transporter ZupT. | GTP-dependent nucleic acid-binding protein engD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.403 |
OJG27866.1 | OJG27865.1 | RU98_GL002075 | RU98_GL002074 | Pyruvate oxidase; Belongs to the TPP enzyme family. | Zinc transporter ZupT. | 0.574 |
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