STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG27061.1Hypothetical protein. (295 aa)    
Predicted Functional Partners:
OJG27060.1
Hypothetical protein.
 
 0.987
OJG27059.1
Hypothetical protein.
 
     0.875
OJG27062.1
Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
       0.765
OJG27426.1
Hypothetical protein.
  
 0.748
OJG28482.1
Hypothetical protein.
 
 
 0.637
OJG27161.1
Hypothetical protein.
  
  
  0.631
OJG28655.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
    
 0.606
OJG25432.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
    
 0.606
OJG27306.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
    
 0.606
OJG25945.1
Hypothetical protein.
  
 
  0.592
Your Current Organism:
Enterococcus caccae
NCBI taxonomy Id: 317735
Other names: CCUG 51564, E. caccae, Enterococcus caccae Carvalho et al. 2006, strain 2215-02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.