Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG26614.1 | OJG26822.1 | RU98_GL000404 | RU98_GL003209 | Thiamine pyrophosphokinase. | Phosphomethylpyrimidine kinase. | 0.515 |
OJG26614.1 | OJG27903.1 | RU98_GL000404 | RU98_GL002112 | Thiamine pyrophosphokinase. | Phosphomethylpyrimidine kinase. | 0.515 |
OJG26614.1 | OJG27905.1 | RU98_GL000404 | RU98_GL002114 | Thiamine pyrophosphokinase. | Hypothetical protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.856 |
OJG26821.1 | OJG26822.1 | RU98_GL003208 | RU98_GL003209 | Hypothetical protein. | Phosphomethylpyrimidine kinase. | 0.888 |
OJG26821.1 | OJG26823.1 | RU98_GL003208 | RU98_GL003210 | Hypothetical protein. | GntR family transcriptional regulator. | 0.707 |
OJG26821.1 | OJG26824.1 | RU98_GL003208 | RU98_GL003211 | Hypothetical protein. | Hypothetical protein; Belongs to the flavin oxidoreductase frp family. | 0.662 |
OJG26822.1 | OJG26614.1 | RU98_GL003209 | RU98_GL000404 | Phosphomethylpyrimidine kinase. | Thiamine pyrophosphokinase. | 0.515 |
OJG26822.1 | OJG26821.1 | RU98_GL003209 | RU98_GL003208 | Phosphomethylpyrimidine kinase. | Hypothetical protein. | 0.888 |
OJG26822.1 | OJG26823.1 | RU98_GL003209 | RU98_GL003210 | Phosphomethylpyrimidine kinase. | GntR family transcriptional regulator. | 0.662 |
OJG26822.1 | OJG26824.1 | RU98_GL003209 | RU98_GL003211 | Phosphomethylpyrimidine kinase. | Hypothetical protein; Belongs to the flavin oxidoreductase frp family. | 0.662 |
OJG26822.1 | OJG27903.1 | RU98_GL003209 | RU98_GL002112 | Phosphomethylpyrimidine kinase. | Phosphomethylpyrimidine kinase. | 0.975 |
OJG26822.1 | OJG27905.1 | RU98_GL003209 | RU98_GL002114 | Phosphomethylpyrimidine kinase. | Hypothetical protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.986 |
OJG26822.1 | guaB | RU98_GL003209 | RU98_GL001849 | Phosphomethylpyrimidine kinase. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.663 |
OJG26822.1 | thiE | RU98_GL003209 | RU98_GL002111 | Phosphomethylpyrimidine kinase. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.999 |
OJG26822.1 | thiM | RU98_GL003209 | RU98_GL002113 | Phosphomethylpyrimidine kinase. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.973 |
OJG26822.1 | truA-2 | RU98_GL003209 | RU98_GL000876 | Phosphomethylpyrimidine kinase. | tRNA pseudouridine(38-40) synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.493 |
OJG26823.1 | OJG26821.1 | RU98_GL003210 | RU98_GL003208 | GntR family transcriptional regulator. | Hypothetical protein. | 0.707 |
OJG26823.1 | OJG26822.1 | RU98_GL003210 | RU98_GL003209 | GntR family transcriptional regulator. | Phosphomethylpyrimidine kinase. | 0.662 |
OJG26823.1 | OJG26824.1 | RU98_GL003210 | RU98_GL003211 | GntR family transcriptional regulator. | Hypothetical protein; Belongs to the flavin oxidoreductase frp family. | 0.886 |
OJG26824.1 | OJG26821.1 | RU98_GL003211 | RU98_GL003208 | Hypothetical protein; Belongs to the flavin oxidoreductase frp family. | Hypothetical protein. | 0.662 |
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