STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY42573.1Transposase, IS4 family; PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: cyp:PCC8801_4552 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4. (381 aa)    
Predicted Functional Partners:
AFY44388.1
KEGG: mar:MAE_29510 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.577
AFY42594.1
PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family; KEGG: ava:Ava_B0335 transcription regulator; SPTR: Putative uncharacterized protein.
  
     0.535
AFY42672.1
Hypothetical protein; PFAM: Glycosyl transferases group 1; KEGG: ana:all2549 hypothetical protein; SPTR: All2549 protein.
  
     0.496
AFY42607.1
PFAM: Pheophorbide a oxygenase; Rieske [2Fe-2S] domain; COGs: COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenase large terminal subunit; InterPro IPR017941:IPR013626; KEGG: npu:Npun_R6510 pheophorbide a oxygenase; PFAM: Pheophorbide a oxygenase; Rieske [2Fe-2S] iron-sulphur domain; PRIAM: Pheophorbide a oxygenase; SPTR: Pheophorbide a oxygenase.
  
     0.432
Your Current Organism:
Nostoc sp. PCC7107
NCBI taxonomy Id: 317936
Other names: N. sp. PCC 7107, Nostoc sp. PCC 7107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.