STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY43728.1PFAM: Phycobilisome Linker polypeptide; InterPro IPR001297; KEGG: ana:alr0535 phycobilisome rod-core linker protein; PFAM: Phycobilisome linker domain; SPTR: Rod-core linker protein 2; Belongs to the phycobilisome linker protein family. (247 aa)    
Predicted Functional Partners:
AFY43735.1
Phycocyanin, beta subunit; PFAM: Phycobilisome protein; TIGRFAM: phycocyanin, beta subunit; InterPro IPR012128:IPR006247; KEGG: ava:Ava_2930 phycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycocyanin, beta subunit; TIGRFAM: Phycocyanin, beta subunit.
 
 
 
 0.987
AFY43733.1
PFAM: CpcD/allophycocyanin linker domain; Phycobilisome Linker polypeptide; InterPro IPR001297:IPR008213; KEGG: ana:alr0530 phycocyanin-associated rod linker protein; PFAM: Phycobilisome linker domain; CpcD phycobilisome linker like; SPTR: Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod; Belongs to the phycobilisome linker protein family.
 
 
 
0.965
AFY43734.1
Phycocyanin, alpha subunit; PFAM: Phycobilisome protein; TIGRFAM: phycocyanin, alpha subunit; InterPro IPR012128:IPR006246; KEGG: ava:Ava_2931 phycocyanin, alpha subunit; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycocyanin, alpha subunit; TIGRFAM: Phycocyanin, alpha subunit.
 
 
 
 0.958
AFY43732.1
PFAM: CpcD/allophycocyanin linker domain; InterPro IPR008213; KEGG: ava:Ava_2933 CpcD phycobilisome linker-like; PFAM: CpcD phycobilisome linker like; SPTR: CpcD phycobilisome linker-like.
 
 
 
 0.956
AFY43740.1
Phycocyanin; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: ava:Ava_2926 phycobilisome protein; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycobilisome protein.
  
 
 
 0.949
AFY43995.1
Phycobilisome core linker protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.940
AFY43741.1
Phycocyanin; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: ana:alr0523 phycoerythrocyanin beta chain; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycoerythrocyanin beta chain.
  
 
 
 0.920
AFY43539.1
Allophycocyanin alpha-B subunit apoprotein; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: ava:Ava_3635 phycobilisome protein; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycobilisome protein.
  
 
 
 0.899
AFY44457.1
PFAM: Phycobilisome protein; TIGRFAM: allophycocyanin, beta subunit; InterPro IPR006245:IPR012128; KEGG: npu:Npun_F5388 allophycocyanin, beta subunit ApcB; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Allophycocyanin, beta subunit ApcB; TIGRFAM: Allophycocyanin, beta subunit.
  
 
 
 0.893
AFY43996.1
PFAM: Phycobilisome protein; TIGRFAM: allophycocyanin, beta subunit; InterPro IPR012128:IPR006245; KEGG: ava:Ava_2622 allophycocyanin subunit beta; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Allophycocyanin, beta subunit; TIGRFAM: Allophycocyanin, beta subunit.
  
 
 
 0.880
Your Current Organism:
Nostoc sp. PCC7107
NCBI taxonomy Id: 317936
Other names: N. sp. PCC 7107, Nostoc sp. PCC 7107
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.