STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY44226.1PFAM: Domain of unknown function (DUF1816); InterPro IPR014945; KEGG: ava:Ava_4414 hypothetical protein; PFAM: Protein of unknown function DUF1816; SPTR: Putative uncharacterized protein. (100 aa)    
Predicted Functional Partners:
AFY43258.1
PFAM: Protein of unknown function (DUF3086); KEGG: ana:alr4017 hypothetical protein; SPTR: Alr4017 protein.
  
     0.756
AFY43514.1
KEGG: ava:Ava_0319 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.751
AFY45683.1
Protein of unknown function DUF1997; InterPro IPR018971; KEGG: ava:Ava_4316 hypothetical protein; PFAM: Protein of unknown function DUF1997; SPTR: Putative uncharacterized protein.
  
     0.739
AFY43305.1
PFAM: Radical SAM superfamily; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: ana:all4307 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: All4307 protein.
  
     0.706
AFY42549.1
KEGG: ana:all2716 hypothetical protein; SPTR: All2716 protein.
  
     0.687
AFY42775.1
KEGG: naz:Aazo_3956 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.665
AFY45078.1
KEGG: ava:Ava_1842 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.665
AFY42537.1
KEGG: ava:Ava_2529 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.662
AFY43277.1
PFAM: Predicted periplasmic protein (DUF2233); KEGG: npu:Npun_F3878 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.661
AFY43243.1
Multi-component transcriptional regulator, winged helix family; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Transcriptional regulatory protein, C terminal; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR001789:IPR001867:IPR008207:IPR013767:IPR 003018:IPR013955:IPR003661:IPR003594:IPR000014:IPR001610; KEGG: ava:Ava_0238 multi-component transcriptional regulator; PFAM: [...]
  
 
 0.652
Your Current Organism:
Nostoc sp. PCC7107
NCBI taxonomy Id: 317936
Other names: N. sp. PCC 7107, Nostoc sp. PCC 7107
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