Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sden_0404 | Sden_0552 | Sden_0404 | Sden_0552 | Alanine-glyoxylate aminotransferase. | Aminotransferase, class V. | 0.903 |
Sden_0404 | Sden_1741 | Sden_0404 | Sden_1741 | Alanine-glyoxylate aminotransferase. | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.910 |
Sden_0404 | Sden_1993 | Sden_0404 | Sden_1993 | Alanine-glyoxylate aminotransferase. | Aminotransferase. | 0.931 |
Sden_0404 | alr | Sden_0404 | Sden_0522 | Alanine-glyoxylate aminotransferase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.803 |
Sden_0552 | Sden_0404 | Sden_0552 | Sden_0404 | Aminotransferase, class V. | Alanine-glyoxylate aminotransferase. | 0.903 |
Sden_0552 | Sden_1741 | Sden_0552 | Sden_1741 | Aminotransferase, class V. | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.910 |
Sden_0552 | Sden_1993 | Sden_0552 | Sden_1993 | Aminotransferase, class V. | Aminotransferase. | 0.931 |
Sden_0552 | alr | Sden_0552 | Sden_0522 | Aminotransferase, class V. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.803 |
Sden_1491 | alr | Sden_1491 | Sden_0522 | Conserved hypothetical protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.754 |
Sden_1741 | Sden_0404 | Sden_1741 | Sden_0404 | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Alanine-glyoxylate aminotransferase. | 0.910 |
Sden_1741 | Sden_0552 | Sden_1741 | Sden_0552 | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Aminotransferase, class V. | 0.910 |
Sden_1741 | Sden_1993 | Sden_1741 | Sden_1993 | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Aminotransferase. | 0.916 |
Sden_1741 | alr | Sden_1741 | Sden_0522 | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.979 |
Sden_1993 | Sden_0404 | Sden_1993 | Sden_0404 | Aminotransferase. | Alanine-glyoxylate aminotransferase. | 0.931 |
Sden_1993 | Sden_0552 | Sden_1993 | Sden_0552 | Aminotransferase. | Aminotransferase, class V. | 0.931 |
Sden_1993 | Sden_1741 | Sden_1993 | Sden_1741 | Aminotransferase. | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.916 |
Sden_1993 | alr | Sden_1993 | Sden_0522 | Aminotransferase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.862 |
alr | Sden_0404 | Sden_0522 | Sden_0404 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Alanine-glyoxylate aminotransferase. | 0.803 |
alr | Sden_0552 | Sden_0522 | Sden_0552 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Aminotransferase, class V. | 0.803 |
alr | Sden_1491 | Sden_0522 | Sden_1491 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Conserved hypothetical protein. | 0.754 |
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