Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sden_1583 | Sden_1584 | Sden_1583 | Sden_1584 | ABC transporter, periplasmic domain. | Glutaredoxin. | 0.524 |
Sden_1584 | Sden_1583 | Sden_1584 | Sden_1583 | Glutaredoxin. | ABC transporter, periplasmic domain. | 0.524 |
Sden_1584 | Sden_1585 | Sden_1584 | Sden_1585 | Glutaredoxin. | Transcriptional regulator, TetR family. | 0.447 |
Sden_1584 | Sden_1952 | Sden_1584 | Sden_1952 | Glutaredoxin. | Ribonucleoside-diphosphate reductase class Ia alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.941 |
Sden_1584 | Sden_1953 | Sden_1584 | Sden_1953 | Glutaredoxin. | Ribonucleoside-diphosphate reductase class Ia beta subunit. | 0.481 |
Sden_1584 | Sden_3691 | Sden_1584 | Sden_3691 | Glutaredoxin. | Heavy metal translocating P-type ATPase. | 0.477 |
Sden_1584 | guaB | Sden_1584 | Sden_1269 | Glutaredoxin. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.489 |
Sden_1584 | msrA | Sden_1584 | Sden_1784 | Glutaredoxin. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.717 |
Sden_1584 | msrA-2 | Sden_1584 | Sden_2304 | Glutaredoxin. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.820 |
Sden_1584 | nfuA | Sden_1584 | Sden_3528 | Glutaredoxin. | HesB/YadR/YfhF; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.726 |
Sden_1584 | secB | Sden_1584 | Sden_3696 | Glutaredoxin. | Protein translocase subunit secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.795 |
Sden_1585 | Sden_1584 | Sden_1585 | Sden_1584 | Transcriptional regulator, TetR family. | Glutaredoxin. | 0.447 |
Sden_1952 | Sden_1584 | Sden_1952 | Sden_1584 | Ribonucleoside-diphosphate reductase class Ia alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Glutaredoxin. | 0.941 |
Sden_1952 | Sden_1953 | Sden_1952 | Sden_1953 | Ribonucleoside-diphosphate reductase class Ia alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase class Ia beta subunit. | 0.999 |
Sden_1953 | Sden_1584 | Sden_1953 | Sden_1584 | Ribonucleoside-diphosphate reductase class Ia beta subunit. | Glutaredoxin. | 0.481 |
Sden_1953 | Sden_1952 | Sden_1953 | Sden_1952 | Ribonucleoside-diphosphate reductase class Ia beta subunit. | Ribonucleoside-diphosphate reductase class Ia alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.999 |
Sden_3691 | Sden_1584 | Sden_3691 | Sden_1584 | Heavy metal translocating P-type ATPase. | Glutaredoxin. | 0.477 |
Sden_3691 | msrA | Sden_3691 | Sden_1784 | Heavy metal translocating P-type ATPase. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.465 |
Sden_3691 | msrA-2 | Sden_3691 | Sden_2304 | Heavy metal translocating P-type ATPase. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.674 |
Sden_3691 | nfuA | Sden_3691 | Sden_3528 | Heavy metal translocating P-type ATPase. | HesB/YadR/YfhF; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.413 |
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