node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sden_1832 | rplC | Sden_1832 | Sden_0170 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.672 |
Sden_1832 | rplP | Sden_1832 | Sden_0177 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.651 |
Sden_1832 | rplS | Sden_1832 | Sden_2751 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.654 |
Sden_1832 | rplT | Sden_1832 | Sden_1708 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.662 |
Sden_1832 | rpmA | Sden_1832 | Sden_2926 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.658 |
Sden_1832 | rpmE | Sden_1832 | Sden_3354 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L31P; Binds the 23S rRNA. | 0.613 |
Sden_1832 | rpsE | Sden_1832 | Sden_0187 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.634 |
Sden_1832 | rpsG | Sden_1832 | Sden_0166 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.658 |
Sden_1832 | rpsL | Sden_1832 | Sden_0165 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.693 |
Sden_1832 | rpsQ | Sden_1832 | Sden_0179 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.649 |
rplC | Sden_1832 | Sden_0170 | Sden_1832 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Cold-shock DNA-binding protein family. | 0.672 |
rplC | rplP | Sden_0170 | Sden_0177 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.998 |
rplC | rplS | Sden_0170 | Sden_2751 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.990 |
rplC | rplT | Sden_0170 | Sden_1708 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.989 |
rplC | rpmA | Sden_0170 | Sden_2926 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.991 |
rplC | rpmE | Sden_0170 | Sden_3354 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | LSU ribosomal protein L31P; Binds the 23S rRNA. | 0.981 |
rplC | rpsE | Sden_0170 | Sden_0187 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.995 |
rplC | rpsG | Sden_0170 | Sden_0166 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.994 |
rplC | rpsL | Sden_0170 | Sden_0165 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.994 |
rplC | rpsQ | Sden_0170 | Sden_0179 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.996 |