Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sden_19002,4-dienoyl-CoA reductase. (671 aa)    
Predicted Functional Partners:
Sden_2790
Glutamate synthase (NADPH) large subunit.
  
 
 0.999
Sden_2539
Electron transfer flavoprotein beta-subunit.
  
 
 0.943
Sden_2538
Electron transfer flavoprotein, alpha subunit.
   
 
 0.910
Sden_3058
Oxidoreductase FAD/NAD(P)-binding.
  
 
 0.846
Sden_0963
MOSC domain protein.
   
 0.829
fadB
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.808
Sden_1530
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
  
 0.769
Sden_0823
O-acetylhomoserine/O-acetylserine sulfhydrylase.
  
    0.760
Sden_1463
Ferredoxin, 2Fe-2S type.
   
 0.701
Sden_1954
Ferredoxin.
   
 0.701
Your Current Organism:
Shewanella denitrificans
NCBI taxonomy Id: 318161
Other names: S. denitrificans OS217, Shewanella denitrificans OS217, Shewanella denitrificans str. OS217, Shewanella denitrificans strain OS217
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