STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sden_2225Conserved hypothetical protein. (235 aa)    
Predicted Functional Partners:
Sden_2226
Protein of unknown function DUF182.
 
  
 0.983
mobA
Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
    
 0.914
Sden_0114
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
    
  0.910
Sden_2223
Twin-arginine translocation pathway signal.
 
   
 0.893
Sden_2224
(2Fe-2S)-binding.
 
  
 0.871
Sden_1105
(2Fe-2S)-binding.
 
  
 0.665
Sden_2087
Conserved hypothetical protein.
  
     0.455
Sden_2227
Prolyl aminopeptidase 2. Serine peptidase. MEROPS family S33.
       0.455
Sden_2962
Carbamoyl-phosphate synthase L chain, ATP-binding.
 
  
 0.437
Sden_1685
Hypothetical protein.
  
     0.404
Your Current Organism:
Shewanella denitrificans
NCBI taxonomy Id: 318161
Other names: S. denitrificans OS217, Shewanella denitrificans OS217, Shewanella denitrificans str. OS217, Shewanella denitrificans strain OS217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.