STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfri_0215Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (157 aa)    
Predicted Functional Partners:
Sfri_0838
PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: sme:SMb20420 putative glutathione S-transferase protein.
  
 
  0.937
Sfri_0806
PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: pha:PSHAb0122 putative glutathione S-transferase; Belongs to the GST superfamily.
  
 
  0.931
Sfri_3877
TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: son:SO4702 glutathione reductase.
 
  
 0.926
Sfri_2764
PFAM: glutathione peroxidase; KEGG: son:SO1563 glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.924
Sfri_2853
PFAM: glutathione peroxidase; KEGG: son:SO3349 glutathione peroxidase, putative; Belongs to the glutathione peroxidase family.
   
 0.924
Sfri_1471
PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: pae:PA1655 probable glutathione S-transferase.
  
 
  0.922
Sfri_2513
PFAM: glutathione synthase; glutathione synthase, ATP-binding; KEGG: vfi:VF0976 glutathione synthetase.
  
  
  0.913
gshB
KEGG: son:SO0831 glutathione synthase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase, ATP-binding; RimK domain protein ATP-grasp; Belongs to the prokaryotic GSH synthase family.
     
 0.904
Sfri_2330
Gamma-glutamyltransferase; KEGG: son:SO1952 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.
     
 0.903
Sfri_1534
PFAM: glutaredoxin; Glutathione S-transferase, N-terminal domain protein; KEGG: ppr:PBPRB1270 hypothetical protein.
   
 
  0.900
Your Current Organism:
Shewanella frigidimarina
NCBI taxonomy Id: 318167
Other names: S. frigidimarina NCIMB 400, Shewanella frigidimarina NCIMB 400, Shewanella frigidimarina str. NCIMB 400, Shewanella frigidimarina strain NCIMB 400
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