Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sfri_0804PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: vpa:VPA1416 putative oxidoreductase. (342 aa)    
Predicted Functional Partners:
Sfri_0805
PFAM: ThiJ/PfpI domain protein; KEGG: psp:PSPPH_3239 ThiJ/PfpI family protein.
 
   0.771
Sfri_0806
PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: pha:PSHAb0122 putative glutathione S-transferase; Belongs to the GST superfamily.
 
    0.582
Sfri_0210
PFAM: aldo/keto reductase; KEGG: xcb:XC_0279 oxidoreductase.
   
 
 0.548
Sfri_0803
PFAM: regulatory protein, MarR; KEGG: pae:PA2849 probable transcriptional regulator.
       0.496
Sfri_2068
PFAM: aminoglycoside phosphotransferase; KEGG: bur:Bcep18194_B3038 aminoglycoside phosphotransferase.
 
    0.469
Sfri_3672
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: son:SO0640 alcohol dehydrogenase, zinc-containing.
 
   0.434
Sfri_2216
PFAM: aminoglycoside phosphotransferase; KEGG: ilo:IL1486 predicted aminoglycoside phosphotransferase.
 
    0.425
Sfri_0563
PFAM: Catalase domain protein; KEGG: son:SO1070 catalase; Belongs to the catalase family.
  
  
 0.411
Your Current Organism:
Shewanella frigidimarina
NCBI taxonomy Id: 318167
Other names: S. frigidimarina NCIMB 400, Shewanella frigidimarina NCIMB 400, Shewanella frigidimarina str. NCIMB 400, Shewanella frigidimarina strain NCIMB 400
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