STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfri_2286NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rba:RB1431 putative multicomponent Na+:H+ antiporter subunit D. (437 aa)    
Predicted Functional Partners:
Sfri_2284
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: rco:RC0355 putative multicomponent Na+:H+ antiporter subunit B.
 
 
 0.998
Sfri_2281
PFAM: cation antiporter; KEGG: rru:Rru_A1641 cation antiporter.
 
 
 0.989
Sfri_2285
PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: rru:Rru_A1636 NADH-ubiquinone oxidoreductase, chain 4L.
 
 
 0.989
Sfri_2282
PFAM: multiple resistance and pH regulation protein F; KEGG: rru:Rru_A1640 multiple resistance and pH regulation protein F.
 
 
 0.987
Sfri_2283
TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: rru:Rru_A1639 Na+/H+ antiporter subunit.
 
 
 0.987
Sfri_2288
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rru:Rru_A1634 NADH dehydrogenase (quinone).
 
 
0.987
Sfri_2290
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rru:Rru_A1632 NADH dehydrogenase (quinone).
 
   
0.962
Sfri_2740
PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: noc:Noc_1282 NADH-ubiquinone oxidoreductase, chain 4L.
 
 
 0.942
Sfri_2289
KEGG: rru:Rru_A1633 hypothetical protein.
 
    0.940
Sfri_2737
TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: noc:Noc_1285 Na+/H+ antiporter subunit.
 
 
 0.940
Your Current Organism:
Shewanella frigidimarina
NCBI taxonomy Id: 318167
Other names: S. frigidimarina NCIMB 400, Shewanella frigidimarina NCIMB 400, Shewanella frigidimarina str. NCIMB 400, Shewanella frigidimarina strain NCIMB 400
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.