Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sfri_1150 | Sfri_3510 | Sfri_1150 | Sfri_3510 | KEGG: son:SO3276 hypothetical protein. | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO0572 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.554 |
Sfri_1150 | Sfri_3816 | Sfri_1150 | Sfri_3816 | KEGG: son:SO3276 hypothetical protein. | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO4232 long-chain fatty acid transport protein. | 0.538 |
Sfri_1733 | Sfri_3097 | Sfri_1733 | Sfri_3097 | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO2581 long-chain-fatty-acid--CoA ligase. | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO3664 long-chain-fatty-acid--CoA ligase. | 0.625 |
Sfri_1733 | Sfri_3510 | Sfri_1733 | Sfri_3510 | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO2581 long-chain-fatty-acid--CoA ligase. | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO0572 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.519 |
Sfri_1733 | Sfri_3816 | Sfri_1733 | Sfri_3816 | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO2581 long-chain-fatty-acid--CoA ligase. | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO4232 long-chain fatty acid transport protein. | 0.494 |
Sfri_3097 | Sfri_1733 | Sfri_3097 | Sfri_1733 | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO3664 long-chain-fatty-acid--CoA ligase. | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO2581 long-chain-fatty-acid--CoA ligase. | 0.625 |
Sfri_3097 | Sfri_3510 | Sfri_3097 | Sfri_3510 | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO3664 long-chain-fatty-acid--CoA ligase. | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO0572 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.519 |
Sfri_3097 | Sfri_3816 | Sfri_3097 | Sfri_3816 | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO3664 long-chain-fatty-acid--CoA ligase. | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO4232 long-chain fatty acid transport protein. | 0.494 |
Sfri_3510 | Sfri_1150 | Sfri_3510 | Sfri_1150 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO0572 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | KEGG: son:SO3276 hypothetical protein. | 0.554 |
Sfri_3510 | Sfri_1733 | Sfri_3510 | Sfri_1733 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO0572 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO2581 long-chain-fatty-acid--CoA ligase. | 0.519 |
Sfri_3510 | Sfri_3097 | Sfri_3510 | Sfri_3097 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO0572 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO3664 long-chain-fatty-acid--CoA ligase. | 0.519 |
Sfri_3510 | Sfri_3816 | Sfri_3510 | Sfri_3816 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO0572 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO4232 long-chain fatty acid transport protein. | 0.523 |
Sfri_3816 | Sfri_1150 | Sfri_3816 | Sfri_1150 | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO4232 long-chain fatty acid transport protein. | KEGG: son:SO3276 hypothetical protein. | 0.538 |
Sfri_3816 | Sfri_1733 | Sfri_3816 | Sfri_1733 | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO4232 long-chain fatty acid transport protein. | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO2581 long-chain-fatty-acid--CoA ligase. | 0.494 |
Sfri_3816 | Sfri_3097 | Sfri_3816 | Sfri_3097 | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO4232 long-chain fatty acid transport protein. | PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO3664 long-chain-fatty-acid--CoA ligase. | 0.494 |
Sfri_3816 | Sfri_3510 | Sfri_3816 | Sfri_3510 | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO4232 long-chain fatty acid transport protein. | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO0572 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.523 |
Sfri_3816 | glpK | Sfri_3816 | Sfri_3815 | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO4232 long-chain fatty acid transport protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.447 |
glpK | Sfri_3816 | Sfri_3815 | Sfri_3816 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO4232 long-chain fatty acid transport protein. | 0.447 |