STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU78_00100Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)    
Predicted Functional Partners:
EU78_00105
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.991
EU78_25340
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.977
EU78_12985
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.976
EU78_10975
Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.975
EU78_10970
Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.974
EU78_21340
Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.958
EU78_17490
Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.955
EU78_23120
Phosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.955
EU78_19885
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.954
EU78_02010
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.953
Your Current Organism:
Mycolicibacterium rufum
NCBI taxonomy Id: 318424
Other names: CIP 109273, JCM 16372, M. rufum, Mycobacterium rufum, Mycobacterium rufum Hennessee et al. 2009, Mycobacterium sp. JS14, Mycolicibacterium rufum (Hennessee et al. 2009) Gupta et al. 2018, strain JS14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.