STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU78_20780ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)    
Predicted Functional Partners:
EU78_05310
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
EU78_20775
MCE-family protein MCE3A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.983
EU78_20785
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.981
EU78_20750
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
EU78_20765
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.974
EU78_20760
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
EU78_20770
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
EU78_20755
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.972
EU78_18760
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.952
EU78_23650
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.952
Your Current Organism:
Mycolicibacterium rufum
NCBI taxonomy Id: 318424
Other names: CIP 109273, JCM 16372, M. rufum, Mycobacterium rufum, Mycobacterium rufum Hennessee et al. 2009, Mycobacterium sp. JS14, Mycolicibacterium rufum (Hennessee et al. 2009) Gupta et al. 2018, strain JS14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.