STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU78_23280Phosphoribosylformylglycinamidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)    
Predicted Functional Partners:
EU78_23240
Phosphoribosylglycinamide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
EU78_23275
Phosphoribosylformylglycinamidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
EU78_22110
Phosphoribosylglycinamide formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
EU78_23195
Phosphoribosylaminoimidazole synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
EU78_02670
Phosphoribosylglycinamide formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.955
EU78_23395
Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.954
EU78_23215
Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.950
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase; Involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
EU78_07510
N5-carboxyaminoimidazole ribonucleotide mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.944
EU78_07490
Phosphoribosylaminoimidazole carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.926
Your Current Organism:
Mycolicibacterium rufum
NCBI taxonomy Id: 318424
Other names: CIP 109273, JCM 16372, M. rufum, Mycobacterium rufum, Mycobacterium rufum Hennessee et al. 2009, Mycobacterium sp. JS14, Mycolicibacterium rufum (Hennessee et al. 2009) Gupta et al. 2018, strain JS14
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