STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU78_25035XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)    
Predicted Functional Partners:
EU78_25015
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.949
EU78_25020
Protein glxC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.949
EU78_25025
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.948
EU78_25030
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.917
EU78_25010
Glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.912
EU78_02325
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.626
EU78_14620
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.560
EU78_25040
2-isopropylmalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.552
nadE
NAD synthetase; Catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.504
EU78_08445
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.451
Your Current Organism:
Mycolicibacterium rufum
NCBI taxonomy Id: 318424
Other names: CIP 109273, JCM 16372, M. rufum, Mycobacterium rufum, Mycobacterium rufum Hennessee et al. 2009, Mycobacterium sp. JS14, Mycolicibacterium rufum (Hennessee et al. 2009) Gupta et al. 2018, strain JS14
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