STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0W70_09825Unannotated protein. (408 aa)    
Predicted Functional Partners:
C0W70_09415
Unannotated protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
  
 0.847
C0W70_09425
Unannotated protein.
 
  
 0.829
C0W70_09420
Unannotated protein.
 
    0.828
mgtA
Unannotated protein.
   
 0.496
C0W70_20250
Unannotated protein.
  
 
 0.452
C0W70_05845
Unannotated protein.
   
  
 0.424
C0W70_05850
Unannotated protein.
   
  
 0.424
C0W70_06625
Unannotated protein.
   
  
 0.424
C0W70_12080
Unannotated protein.
   
  
 0.424
C0W70_03705
Unannotated protein.
   
  
 0.424
Your Current Organism:
Photobacterium kishitanii
NCBI taxonomy Id: 318456
Other names: LMG 23890, LMG:23890, P. kishitanii, Photobacterium kishitanii Ast et al. 2007, strain pjapo.1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.