STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0W70_12245Unannotated protein. (230 aa)    
Predicted Functional Partners:
C0W70_12250
Unannotated protein.
 
    
0.836
C0W70_13400
Unannotated protein.
    
   0.758
GCA_001455895_02086
Unannotated protein.
    
 0.721
C0W70_07930
Unannotated protein.
    
 0.689
C0W70_08435
Unannotated protein.
  
     0.684
C0W70_12685
Unannotated protein.
   
 0.678
C0W70_01975
Unannotated protein.
  
 
  0.641
C0W70_04185
Unannotated protein.
  
 
  0.589
C0W70_01770
Unannotated protein.
   
 
 0.579
C0W70_16205
Unannotated protein.
  
 0.553
Your Current Organism:
Photobacterium kishitanii
NCBI taxonomy Id: 318456
Other names: LMG 23890, LMG:23890, P. kishitanii, Photobacterium kishitanii Ast et al. 2007, strain pjapo.1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.