Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C0W70_09340 | C0W70_09345 | GCA_001455895_03286 | GCA_001455895_03287 | Unannotated protein. | Unannotated protein. | 0.527 |
C0W70_09340 | C0W70_14670 | GCA_001455895_03286 | GCA_001455895_04426 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.539 |
C0W70_09340 | C0W70_19090 | GCA_001455895_03286 | GCA_001455895_01105 | Unannotated protein. | Unannotated protein. | 0.503 |
C0W70_09340 | C0W70_19630 | GCA_001455895_03286 | GCA_001455895_01577 | Unannotated protein. | Unannotated protein. | 0.949 |
C0W70_09340 | C0W70_19985 | GCA_001455895_03286 | GCA_001455895_02137 | Unannotated protein. | Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...] | 0.948 |
C0W70_09340 | C0W70_21560 | GCA_001455895_03286 | GCA_001455895_02264 | Unannotated protein. | Unannotated protein. | 0.682 |
C0W70_09340 | dnaX | GCA_001455895_03286 | GCA_001455895_03929 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.942 |
C0W70_09340 | holB | GCA_001455895_03286 | GCA_001455895_03243 | Unannotated protein. | Unannotated protein. | 0.760 |
C0W70_09340 | polA | GCA_001455895_03286 | GCA_001455895_01369 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.528 |
C0W70_09340 | rpmD | GCA_001455895_03286 | GCA_001455895_02515 | Unannotated protein. | Unannotated protein. | 0.531 |
C0W70_09345 | C0W70_09340 | GCA_001455895_03287 | GCA_001455895_03286 | Unannotated protein. | Unannotated protein. | 0.527 |
C0W70_14670 | C0W70_09340 | GCA_001455895_04426 | GCA_001455895_03286 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unannotated protein. | 0.539 |
C0W70_14670 | C0W70_19090 | GCA_001455895_04426 | GCA_001455895_01105 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unannotated protein. | 0.974 |
C0W70_14670 | C0W70_19630 | GCA_001455895_04426 | GCA_001455895_01577 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unannotated protein. | 0.967 |
C0W70_14670 | C0W70_19985 | GCA_001455895_04426 | GCA_001455895_02137 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...] | 0.791 |
C0W70_14670 | C0W70_21560 | GCA_001455895_04426 | GCA_001455895_02264 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unannotated protein. | 0.977 |
C0W70_14670 | dnaX | GCA_001455895_04426 | GCA_001455895_03929 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.974 |
C0W70_14670 | holB | GCA_001455895_04426 | GCA_001455895_03243 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unannotated protein. | 0.973 |
C0W70_19090 | C0W70_09340 | GCA_001455895_01105 | GCA_001455895_03286 | Unannotated protein. | Unannotated protein. | 0.503 |
C0W70_19090 | C0W70_14670 | GCA_001455895_01105 | GCA_001455895_04426 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.974 |
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