Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C0W70_03470 | C0W70_03475 | GCA_001455895_03689 | GCA_001455895_03688 | Unannotated protein. | Unannotated protein. | 0.939 |
C0W70_03470 | C0W70_03480 | GCA_001455895_03689 | GCA_001455895_03687 | Unannotated protein. | Unannotated protein. | 0.936 |
C0W70_03470 | cmoA | GCA_001455895_03689 | GCA_001455895_03691 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.579 |
C0W70_03470 | cmoB | GCA_001455895_03689 | GCA_001455895_03690 | Unannotated protein. | Unannotated protein; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | 0.599 |
C0W70_03475 | C0W70_03470 | GCA_001455895_03688 | GCA_001455895_03689 | Unannotated protein. | Unannotated protein. | 0.939 |
C0W70_03475 | C0W70_03480 | GCA_001455895_03688 | GCA_001455895_03687 | Unannotated protein. | Unannotated protein. | 0.958 |
C0W70_03475 | cmoA | GCA_001455895_03688 | GCA_001455895_03691 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.564 |
C0W70_03475 | cmoB | GCA_001455895_03688 | GCA_001455895_03690 | Unannotated protein. | Unannotated protein; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | 0.584 |
C0W70_03480 | C0W70_03470 | GCA_001455895_03687 | GCA_001455895_03689 | Unannotated protein. | Unannotated protein. | 0.936 |
C0W70_03480 | C0W70_03475 | GCA_001455895_03687 | GCA_001455895_03688 | Unannotated protein. | Unannotated protein. | 0.958 |
C0W70_03480 | cmoA | GCA_001455895_03687 | GCA_001455895_03691 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.564 |
C0W70_03480 | cmoB | GCA_001455895_03687 | GCA_001455895_03690 | Unannotated protein. | Unannotated protein; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | 0.584 |
C0W70_07560 | cmoB | GCA_001455895_02785 | GCA_001455895_03690 | Unannotated protein. | Unannotated protein; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | 0.694 |
C0W70_07560 | cmoM | GCA_001455895_02785 | GCA_001455895_03848 | Unannotated protein. | Unannotated protein; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family. | 0.629 |
C0W70_07560 | mnmC | GCA_001455895_02785 | GCA_001455895_03056 | Unannotated protein. | Unannotated protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.458 |
C0W70_17850 | cmoA | GCA_001455895_01473 | GCA_001455895_03691 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.522 |
C0W70_17850 | cmoB | GCA_001455895_01473 | GCA_001455895_03690 | Unannotated protein. | Unannotated protein; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | 0.536 |
C0W70_17850 | cmoM | GCA_001455895_01473 | GCA_001455895_03848 | Unannotated protein. | Unannotated protein; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family. | 0.650 |
C0W70_17850 | glyA | GCA_001455895_01473 | GCA_001455895_04161 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.535 |
cmoA | C0W70_03470 | GCA_001455895_03691 | GCA_001455895_03689 | Unannotated protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | Unannotated protein. | 0.579 |
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