Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C0W70_10650 | C0W70_10655 | GCA_001455895_04323 | GCA_001455895_04324 | Unannotated protein. | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | 0.402 |
C0W70_10655 | C0W70_10650 | GCA_001455895_04324 | GCA_001455895_04323 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein. | 0.402 |
C0W70_10655 | C0W70_10660 | GCA_001455895_04324 | GCA_001455895_04325 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein. | 0.499 |
C0W70_10655 | C0W70_10670 | GCA_001455895_04324 | GCA_001455895_04326 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein. | 0.439 |
C0W70_10655 | C0W70_20405 | GCA_001455895_04324 | GCA_001455895_02987 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein. | 0.728 |
C0W70_10655 | C0W70_22440 | GCA_001455895_04324 | GCA_001455895_02395 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.444 |
C0W70_10655 | cmk | GCA_001455895_04324 | GCA_001455895_03779 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein. | 0.660 |
C0W70_10655 | der | GCA_001455895_04324 | GCA_001455895_01648 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.731 |
C0W70_10655 | rlmL | GCA_001455895_04324 | GCA_001455895_01982 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.740 |
C0W70_10655 | truB | GCA_001455895_04324 | GCA_001455895_04436 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.444 |
C0W70_10660 | C0W70_10655 | GCA_001455895_04325 | GCA_001455895_04324 | Unannotated protein. | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | 0.499 |
C0W70_10660 | C0W70_10670 | GCA_001455895_04325 | GCA_001455895_04326 | Unannotated protein. | Unannotated protein. | 0.670 |
C0W70_10670 | C0W70_10655 | GCA_001455895_04326 | GCA_001455895_04324 | Unannotated protein. | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | 0.439 |
C0W70_10670 | C0W70_10660 | GCA_001455895_04326 | GCA_001455895_04325 | Unannotated protein. | Unannotated protein. | 0.670 |
C0W70_20405 | C0W70_10655 | GCA_001455895_02987 | GCA_001455895_04324 | Unannotated protein. | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | 0.728 |
C0W70_20405 | rlmL | GCA_001455895_02987 | GCA_001455895_01982 | Unannotated protein. | Unannotated protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.549 |
C0W70_22440 | C0W70_10655 | GCA_001455895_02395 | GCA_001455895_04324 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | 0.444 |
C0W70_22440 | der | GCA_001455895_02395 | GCA_001455895_01648 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.507 |
C0W70_22440 | rlmL | GCA_001455895_02395 | GCA_001455895_01982 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.458 |
C0W70_22440 | truB | GCA_001455895_02395 | GCA_001455895_04436 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.521 |
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