Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IO99_04475Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)    
Predicted Functional Partners:
IO99_04470
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.941
IO99_04460
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
IO99_05610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
IO99_02675
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
IO99_06580
Diadenosine tetraphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
IO99_03115
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.472
IO99_17465
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.471
IO99_12305
DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.470
IO99_17610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
IO99_06250
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.438
Your Current Organism:
Clostridium sulfidigenes
NCBI taxonomy Id: 318464
Other names: C. sulfidigenes, Clostridium sulfidigenes Sallam and Steinbuchel 2009, DSM 18982, strain SGB2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.