STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IO99_05830Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)    
Predicted Functional Partners:
IO99_05835
PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.965
IO99_05600
PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.847
IO99_15585
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.843
IO99_10280
PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.841
IO99_02225
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.838
IO99_06150
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.836
IO99_12020
PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.836
IO99_10900
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.833
IO99_08645
PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.831
IO99_09625
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.831
Your Current Organism:
Clostridium sulfidigenes
NCBI taxonomy Id: 318464
Other names: C. sulfidigenes, Clostridium sulfidigenes Sallam and Steinbuchel 2009, DSM 18982, strain SGB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.