Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IO99_07930Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)    
Predicted Functional Partners:
IO99_08055
ScdA; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
  
  
 0.984
IO99_03410
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.907
IO99_05685
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.827
IO99_07740
Disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.827
IO99_10195
Disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.827
IO99_14530
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.
    
 0.804
IO99_03255
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.794
IO99_11195
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.771
IO99_02060
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.757
IO99_06415
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.744
Your Current Organism:
Clostridium sulfidigenes
NCBI taxonomy Id: 318464
Other names: C. sulfidigenes, Clostridium sulfidigenes Sallam and Steinbuchel 2009, DSM 18982, strain SGB2
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