STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IO99_12445Peptidase S8 and S53 subtilisin kexin sedolisin; Derived by automated computational analysis using gene prediction method: Protein Homology. (619 aa)    
Predicted Functional Partners:
IO99_12450
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.830
IO99_15580
Spore cortex-lytic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.790
IO99_13600
Spore cortex-lytic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.750
IO99_08635
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.740
IO99_10465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
IO99_10930
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
IO99_14180
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.647
IO99_10695
Single-stranded DNA-binding protein; Binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.642
IO99_18435
Benzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.599
IO99_14160
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.546
Your Current Organism:
Clostridium sulfidigenes
NCBI taxonomy Id: 318464
Other names: C. sulfidigenes, Clostridium sulfidigenes Sallam and Steinbuchel 2009, DSM 18982, strain SGB2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.