STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DME_LOCUS9104Uncharacterized protein. (258 aa)    
Predicted Functional Partners:
DME_LOCUS3343
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.869
DME_LOCUS2844
Ubiquitin-like domain-containing protein.
    
 0.797
DME_LOCUS1003
Ubiquitin-like domain-containing protein.
    
  0.787
DME_LOCUS3619
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.756
DME_LOCUS10223
Uncharacterized protein.
   
 
 0.719
DME_LOCUS4711
Ribosomal_L2_C domain-containing protein.
   
 
 0.712
DME_LOCUS9175
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.707
DME_LOCUS10019
MPN domain-containing protein.
    
 0.703
DME_LOCUS10700
Uncharacterized protein.
   
 0.695
DME_LOCUS10169
Uncharacterized protein.
   
   0.694
Your Current Organism:
Dracunculus medinensis
NCBI taxonomy Id: 318479
Other names: D. medinensis, Guinea worm, Guinea worm disease nematode, dracunculiasis worm
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