STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DME_LOCUS1600Aspartate aminotransferase. (330 aa)    
Predicted Functional Partners:
DME_LOCUS1638
Nsp1_C domain-containing protein.
    
 
 0.930
DME_LOCUS693
Uncharacterized protein.
   
 0.894
DME_LOCUS2853
4-hydroxyphenylpyruvate dioxygenase; Belongs to the 4HPPD family.
  
 
 0.890
DME_LOCUS1020
Aspartate aminotransferase.
  
0.882
DME_LOCUS3392
Uncharacterized protein.
    
 0.864
DME_LOCUS4603
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
   
 0.842
DME_LOCUS2858
Uncharacterized protein.
    
 0.839
DME_LOCUS9544
Malate dehydrogenase.
   
 0.828
DME_LOCUS1312
RING-type domain-containing protein.
   
 0.828
DME_LOCUS1311
Uncharacterized protein.
   
 0.828
Your Current Organism:
Dracunculus medinensis
NCBI taxonomy Id: 318479
Other names: D. medinensis, Guinea worm, Guinea worm disease nematode, dracunculiasis worm
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.