STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DME_LOCUS10515Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
DME_LOCUS2452
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.927
DME_LOCUS877
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.920
DME_LOCUS698
Uncharacterized protein.
  
 0.917
DME_LOCUS1709
Uncharacterized protein.
   
 0.903
DME_LOCUS41
WD_REPEATS_REGION domain-containing protein.
   
 0.902
DME_LOCUS10516
DUF4217 domain-containing protein; Belongs to the DEAD box helicase family.
 
      0.899
DME_LOCUS7789
OBG-type G domain-containing protein.
   
 
 0.892
DME_LOCUS962
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.888
DME_LOCUS3602
RRM domain-containing protein.
   
 
 0.885
DME_LOCUS5387
CP-type G domain-containing protein.
  
 0.874
Your Current Organism:
Dracunculus medinensis
NCBI taxonomy Id: 318479
Other names: D. medinensis, Guinea worm, Guinea worm disease nematode, dracunculiasis worm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.