STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DME_LOCUS3466PDDEXK_1 domain-containing protein. (300 aa)    
Predicted Functional Partners:
DME_LOCUS5704
ECSIT_Cterm domain-containing protein.
    
   0.650
DME_LOCUS3533
SF4 helicase domain-containing protein.
      
 0.540
DME_LOCUS3264
Uncharacterized protein.
      
 0.539
DME_LOCUS2112
Uncharacterized protein.
   
  
 0.528
DME_LOCUS3274
N2227 domain-containing protein.
      
 0.502
DME_LOCUS10149
POLAc domain-containing protein.
    
 
 0.485
DME_LOCUS9365
Mago-bind domain-containing protein.
      
 0.440
DME_LOCUS4842
Uncharacterized protein.
      
 0.440
DME_LOCUS10466
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
      
 0.435
DME_LOCUS8247
Uncharacterized protein.
      
 0.403
Your Current Organism:
Dracunculus medinensis
NCBI taxonomy Id: 318479
Other names: D. medinensis, Guinea worm, Guinea worm disease nematode, dracunculiasis worm
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