STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DME_LOCUS2762COMM domain-containing protein. (103 aa)    
Predicted Functional Partners:
DME_LOCUS7805
Uncharacterized protein.
    
 0.984
DME_LOCUS161
Uncharacterized protein.
    
 0.949
DME_LOCUS7115
Uncharacterized protein.
    
 0.914
DME_LOCUS2603
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
    
 
 0.907
DME_LOCUS974
SANT domain-containing protein.
    
 0.853
DME_LOCUS1831
Uncharacterized protein.
    
 0.853
DME_LOCUS5070
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.740
DME_LOCUS6759
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 
  0.711
DME_LOCUS2827
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 
 0.702
DME_LOCUS8322
Uncharacterized protein.
    
 
 0.700
Your Current Organism:
Dracunculus medinensis
NCBI taxonomy Id: 318479
Other names: D. medinensis, Guinea worm, Guinea worm disease nematode, dracunculiasis worm
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