node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pden_0874 | Pden_0876 | Pden_0874 | Pden_0876 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: rde:RD1_1456 EAL domain protein. | 0.488 |
Pden_0874 | Pden_0878 | Pden_0874 | Pden_0878 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein. | 0.417 |
Pden_0874 | engB | Pden_0874 | Pden_0879 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Small GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.528 |
Pden_0874 | rnpA | Pden_0874 | Pden_0873 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.988 |
Pden_0874 | ttcA | Pden_0874 | Pden_0875 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | PP-loop domain protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. | 0.773 |
Pden_0874 | yidC | Pden_0874 | Pden_0877 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.893 |
Pden_0876 | Pden_0874 | Pden_0876 | Pden_0874 | Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: rde:RD1_1456 EAL domain protein. | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.488 |
Pden_0876 | Pden_0878 | Pden_0876 | Pden_0878 | Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: rde:RD1_1456 EAL domain protein. | PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein. | 0.447 |
Pden_0876 | engB | Pden_0876 | Pden_0879 | Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: rde:RD1_1456 EAL domain protein. | Small GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.452 |
Pden_0876 | rnpA | Pden_0876 | Pden_0873 | Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: rde:RD1_1456 EAL domain protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.488 |
Pden_0876 | ttcA | Pden_0876 | Pden_0875 | Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: rde:RD1_1456 EAL domain protein. | PP-loop domain protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. | 0.599 |
Pden_0876 | yidC | Pden_0876 | Pden_0877 | Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: rde:RD1_1456 EAL domain protein. | Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.452 |
Pden_0878 | Pden_0874 | Pden_0878 | Pden_0874 | PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein. | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.417 |
Pden_0878 | Pden_0876 | Pden_0878 | Pden_0876 | PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein. | Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: rde:RD1_1456 EAL domain protein. | 0.447 |
Pden_0878 | Pden_0881 | Pden_0878 | Pden_0881 | PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein. | Putative phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; KEGG: rsp:RSP_1070 hypothetical protein. | 0.617 |
Pden_0878 | argB | Pden_0878 | Pden_0880 | PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.746 |
Pden_0878 | engB | Pden_0878 | Pden_0879 | PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein. | Small GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.883 |
Pden_0878 | purQ | Pden_0878 | Pden_2962 | PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein. | Phosphoribosylformylglycinamidine synthase subunit I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...] | 0.408 |
Pden_0878 | rnpA | Pden_0878 | Pden_0873 | PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.411 |
Pden_0878 | ttcA | Pden_0878 | Pden_0875 | PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein. | PP-loop domain protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. | 0.563 |