Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Pden_0930Hypothetical protein. (117 aa)    
Predicted Functional Partners:
Pden_0489
KEGG: rsp:RSP_1148 hypothetical protein.
  
     0.657
Pden_0786
Transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; KEGG: jan:Jann_0619 transcriptional regulator, LuxR family.
  
     0.653
Pden_1753
KEGG: rsp:RSP_0683 hypothetical protein.
  
     0.598
Pden_0428
PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0736 MobC protein.
  
     0.584
Pden_1551
PFAM: protein of unknown function DUF481; KEGG: rsp:RSP_0753 salt-stress induced outer membrane protein.
  
     0.582
Pden_1748
PFAM: MltA-interacting MipA family protein; KEGG: rpc:RPC_0793 MltA-interacting MipA.
  
     0.511
Pden_0931
PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_2856 putative oligopeptide ABC transporter, periplasmic-binding protein.
       0.505
Pden_3969
KEGG: rsp:RSP_0432 hypothetical protein.
  
     0.482
Pden_2240
KEGG: jan:Jann_1184 lipoprotein, putative.
  
     0.474
Pden_0787
KEGG: jan:Jann_0620 N-acyl-L-homoserine lactone synthetase-like; Belongs to the autoinducer synthase family.
  
     0.469
Your Current Organism:
Paracoccus denitrificans
NCBI taxonomy Id: 318586
Other names: P. denitrificans PD1222, Paracoccus denitrificans PD1222
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.