STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pden_1931KEGG: rsp:RSP_6052 hypothetical protein. (1096 aa)    
Predicted Functional Partners:
Pden_0685
Cell division and transport-associated protein TolA; PFAM: TolA family protein; KEGG: rsp:RSP_0670 possible TolA protein; TC 2.C.1.2.1.
  
  
 0.794
Pden_2135
KEGG: cel:ZK84.1 Hypothetical protein ZK84.1.
 
     0.777
Pden_4338
KEGG: mes:Meso_2597 PE-PGRS family protein.
  
   
 0.777
Pden_2218
PFAM: Sporulation domain protein; KEGG: rsp:RSP_6008 hypothetical protein.
 
     0.776
Pden_0537
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1855 hypothetical protein.
  
     0.774
Pden_1407
KEGG: rsp:RSP_2286 hypothetical protein.
  
     0.773
Pden_2240
KEGG: jan:Jann_1184 lipoprotein, putative.
  
     0.772
Pden_1237
KEGG: sil:SPO0951 hypothetical protein.
  
     0.770
Pden_1996
KEGG: jan:Jann_4082 hypothetical protein.
  
     0.769
Pden_2461
TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; KEGG: pau:PA14_61200 hypothetical protein.
  
     0.766
Your Current Organism:
Paracoccus denitrificans
NCBI taxonomy Id: 318586
Other names: P. denitrificans PD1222, Paracoccus denitrificans PD1222
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.