STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pden_1990KEGG: jan:Jann_2690 hypothetical protein. (201 aa)    
Predicted Functional Partners:
Pden_2244
KEGG: jan:Jann_1178 hypothetical protein.
  
     0.645
Pden_1407
KEGG: rsp:RSP_2286 hypothetical protein.
  
     0.631
Pden_2788
PFAM: protein of unknown function DUF900, hydrolase family protein; KEGG: sil:SPO3883 lipoprotein, putative.
  
     0.630
Pden_4338
KEGG: mes:Meso_2597 PE-PGRS family protein.
  
     0.586
Pden_2792
KEGG: rsp:RSP_1530 hypothetical protein.
  
     0.579
Pden_1989
PFAM: AFG1-family ATPase; KEGG: rsp:RSP_1349 hypothetical protein.
       0.559
Pden_1982
KEGG: sit:TM1040_2681 conserved hypothetical protein.
  
     0.543
Pden_1931
KEGG: rsp:RSP_6052 hypothetical protein.
  
     0.539
Pden_1810
KEGG: sit:TM1040_0171 conserved hypothetical protein.
  
     0.538
Pden_3298
KEGG: sat:SYN_02345 hypothetical membrane protein.
  
     0.529
Your Current Organism:
Paracoccus denitrificans
NCBI taxonomy Id: 318586
Other names: P. denitrificans PD1222, Paracoccus denitrificans PD1222
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.