node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pden_1551 | Pden_2816 | Pden_1551 | Pden_2816 | PFAM: protein of unknown function DUF481; KEGG: rsp:RSP_0753 salt-stress induced outer membrane protein. | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | 0.452 |
Pden_2188 | Pden_2816 | Pden_2188 | Pden_2816 | PFAM: protein of unknown function DUF808; KEGG: jan:Jann_1699 protein of unknown function DUF808. | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | 0.416 |
Pden_2816 | Pden_1551 | Pden_2816 | Pden_1551 | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | PFAM: protein of unknown function DUF481; KEGG: rsp:RSP_0753 salt-stress induced outer membrane protein. | 0.452 |
Pden_2816 | Pden_2188 | Pden_2816 | Pden_2188 | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | PFAM: protein of unknown function DUF808; KEGG: jan:Jann_1699 protein of unknown function DUF808. | 0.416 |
Pden_2816 | Pden_2817 | Pden_2816 | Pden_2817 | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: pae:PA2722 hypothetical protein. | 0.663 |
Pden_2816 | Pden_2954 | Pden_2816 | Pden_2954 | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | PFAM: protein of unknown function UPF0118; KEGG: jan:Jann_2214 protein of unknown function UPF0118. | 0.412 |
Pden_2816 | Pden_3341 | Pden_2816 | Pden_3341 | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | TIGRFAM: arsenate reductase; PFAM: low molecular weight phosphotyrosine protein phosphatase; arsenate reductase and related; KEGG: nwi:Nwi_3124 low molecular weight phosphotyrosine protein phosphatase; Belongs to the ArsC family. | 0.454 |
Pden_2816 | aroE | Pden_2816 | Pden_2813 | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.581 |
Pden_2816 | coaE | Pden_2816 | Pden_2814 | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.575 |
Pden_2816 | dnaQ | Pden_2816 | Pden_2815 | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.575 |
Pden_2816 | polA | Pden_2816 | Pden_1853 | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.423 |
Pden_2816 | rho | Pden_2816 | Pden_0002 | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.633 |
Pden_2817 | Pden_2816 | Pden_2817 | Pden_2816 | PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: pae:PA2722 hypothetical protein. | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | 0.663 |
Pden_2817 | aroE | Pden_2817 | Pden_2813 | PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: pae:PA2722 hypothetical protein. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.488 |
Pden_2817 | coaE | Pden_2817 | Pden_2814 | PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: pae:PA2722 hypothetical protein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.488 |
Pden_2817 | dnaQ | Pden_2817 | Pden_2815 | PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: pae:PA2722 hypothetical protein. | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.488 |
Pden_2954 | Pden_2816 | Pden_2954 | Pden_2816 | PFAM: protein of unknown function UPF0118; KEGG: jan:Jann_2214 protein of unknown function UPF0118. | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | 0.412 |
Pden_3341 | Pden_2816 | Pden_3341 | Pden_2816 | TIGRFAM: arsenate reductase; PFAM: low molecular weight phosphotyrosine protein phosphatase; arsenate reductase and related; KEGG: nwi:Nwi_3124 low molecular weight phosphotyrosine protein phosphatase; Belongs to the ArsC family. | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | 0.454 |
Pden_3341 | polA | Pden_3341 | Pden_1853 | TIGRFAM: arsenate reductase; PFAM: low molecular weight phosphotyrosine protein phosphatase; arsenate reductase and related; KEGG: nwi:Nwi_3124 low molecular weight phosphotyrosine protein phosphatase; Belongs to the ArsC family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.495 |
aroE | Pden_2816 | Pden_2813 | Pden_2816 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rde:RD1_0088 ribonuclease BN, putative. | 0.581 |