node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pden_2871 | Pden_3700 | Pden_2871 | Pden_3700 | PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: rsp:RSP_2196 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase. | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.408 |
Pden_3697 | Pden_3700 | Pden_3697 | Pden_3700 | PFAM: thiamine monophosphate synthase; KEGG: rsp:RSP_3828 putative thiamine-phosphate pyrophosphorylase. | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.651 |
Pden_3697 | ctaA | Pden_3697 | Pden_3699 | PFAM: thiamine monophosphate synthase; KEGG: rsp:RSP_3828 putative thiamine-phosphate pyrophosphorylase. | Cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.660 |
Pden_3697 | trmJ | Pden_3697 | Pden_3698 | PFAM: thiamine monophosphate synthase; KEGG: rsp:RSP_3828 putative thiamine-phosphate pyrophosphorylase. | RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | 0.740 |
Pden_3700 | Pden_2871 | Pden_3700 | Pden_2871 | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: rsp:RSP_2196 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase. | 0.408 |
Pden_3700 | Pden_3697 | Pden_3700 | Pden_3697 | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | PFAM: thiamine monophosphate synthase; KEGG: rsp:RSP_3828 putative thiamine-phosphate pyrophosphorylase. | 0.651 |
Pden_3700 | ctaA | Pden_3700 | Pden_3699 | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | Cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.877 |
Pden_3700 | miaB | Pden_3700 | Pden_3701 | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.575 |
Pden_3700 | rho | Pden_3700 | Pden_0002 | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.420 |
Pden_3700 | trmJ | Pden_3700 | Pden_3698 | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | 0.819 |
ctaA | Pden_3697 | Pden_3699 | Pden_3697 | Cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | PFAM: thiamine monophosphate synthase; KEGG: rsp:RSP_3828 putative thiamine-phosphate pyrophosphorylase. | 0.660 |
ctaA | Pden_3700 | Pden_3699 | Pden_3700 | Cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.877 |
ctaA | miaB | Pden_3699 | Pden_3701 | Cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.532 |
ctaA | trmJ | Pden_3699 | Pden_3698 | Cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | 0.819 |
miaB | Pden_3700 | Pden_3701 | Pden_3700 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.575 |
miaB | ctaA | Pden_3701 | Pden_3699 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | Cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.532 |
miaB | trmJ | Pden_3701 | Pden_3698 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | 0.498 |
rho | Pden_3700 | Pden_0002 | Pden_3700 | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.420 |
trmJ | Pden_3697 | Pden_3698 | Pden_3697 | RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | PFAM: thiamine monophosphate synthase; KEGG: rsp:RSP_3828 putative thiamine-phosphate pyrophosphorylase. | 0.740 |
trmJ | Pden_3700 | Pden_3698 | Pden_3700 | RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | Carboxypeptidase Taq, Metallo peptidase, MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.819 |