Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pden_3708 | Pden_3709 | Pden_3708 | Pden_3709 | PFAM: protein of unknown function DUF1330; KEGG: sit:TM1040_1707 protein of unknown function DUF1330. | PFAM: protein of unknown function DUF344; KEGG: sme:SMa0172 hypothetical protein. | 0.575 |
Pden_3708 | Pden_3710 | Pden_3708 | Pden_3710 | PFAM: protein of unknown function DUF1330; KEGG: sit:TM1040_1707 protein of unknown function DUF1330. | Hypothetical protein. | 0.445 |
Pden_3708 | pyrG | Pden_3708 | Pden_3711 | PFAM: protein of unknown function DUF1330; KEGG: sit:TM1040_1707 protein of unknown function DUF1330. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.491 |
Pden_3709 | Pden_3708 | Pden_3709 | Pden_3708 | PFAM: protein of unknown function DUF344; KEGG: sme:SMa0172 hypothetical protein. | PFAM: protein of unknown function DUF1330; KEGG: sit:TM1040_1707 protein of unknown function DUF1330. | 0.575 |
Pden_3709 | Pden_3710 | Pden_3709 | Pden_3710 | PFAM: protein of unknown function DUF344; KEGG: sme:SMa0172 hypothetical protein. | Hypothetical protein. | 0.596 |
Pden_3709 | pyrG | Pden_3709 | Pden_3711 | PFAM: protein of unknown function DUF344; KEGG: sme:SMa0172 hypothetical protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.493 |
Pden_3710 | Pden_3708 | Pden_3710 | Pden_3708 | Hypothetical protein. | PFAM: protein of unknown function DUF1330; KEGG: sit:TM1040_1707 protein of unknown function DUF1330. | 0.445 |
Pden_3710 | Pden_3709 | Pden_3710 | Pden_3709 | Hypothetical protein. | PFAM: protein of unknown function DUF344; KEGG: sme:SMa0172 hypothetical protein. | 0.596 |
Pden_3710 | pyrG | Pden_3710 | Pden_3711 | Hypothetical protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.634 |
pyrG | Pden_3708 | Pden_3711 | Pden_3708 | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | PFAM: protein of unknown function DUF1330; KEGG: sit:TM1040_1707 protein of unknown function DUF1330. | 0.491 |
pyrG | Pden_3709 | Pden_3711 | Pden_3709 | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | PFAM: protein of unknown function DUF344; KEGG: sme:SMa0172 hypothetical protein. | 0.493 |
pyrG | Pden_3710 | Pden_3711 | Pden_3710 | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | Hypothetical protein. | 0.634 |