STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pden_3757Hypothetical protein. (84 aa)    
Predicted Functional Partners:
Pden_3758
KEGG: ppu:PP_1573 major tail protein, putative.
       0.773
Pden_3756
TIGRFAM: phage terminase, large subunit, PBSX family; KEGG: zmo:ZMO0379 terminase.
       0.590
Pden_3759
KEGG: ppr:PBPRB0567 putative head-tail connector protein.
       0.419
Pden_3760
Hypothetical protein.
       0.419
Pden_3761
Hypothetical protein; KEGG: ppr:PBPRB0569 putative endoprotease.
       0.419
Pden_3762
KEGG: ppr:PBPRB0570 hypothetical protein.
       0.419
Pden_3754
Hypothetical protein.
       0.412
Pden_3755
KEGG: ngo:NGO0494 hypothetical protein, putative phage associated protein.
       0.412
Your Current Organism:
Paracoccus denitrificans
NCBI taxonomy Id: 318586
Other names: P. denitrificans PD1222, Paracoccus denitrificans PD1222
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.