Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pden_2095 | Pden_3792 | Pden_2095 | Pden_3792 | PFAM: DSBA oxidoreductase; KEGG: sit:TM1040_2643 thiol:disulfide interchange protein, DsbA family. | PFAM: DSBA oxidoreductase; KEGG: sil:SPOA0362 27kDa outer membrane protein. | 0.705 |
Pden_2095 | Pden_3866 | Pden_2095 | Pden_3866 | PFAM: DSBA oxidoreductase; KEGG: sit:TM1040_2643 thiol:disulfide interchange protein, DsbA family. | PFAM: Disulphide bond formation protein DsbB; KEGG: sil:SPO2117 disulfide bond formation protein, DsbB family. | 0.626 |
Pden_2095 | polA | Pden_2095 | Pden_1853 | PFAM: DSBA oxidoreductase; KEGG: sit:TM1040_2643 thiol:disulfide interchange protein, DsbA family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.487 |
Pden_3792 | Pden_2095 | Pden_3792 | Pden_2095 | PFAM: DSBA oxidoreductase; KEGG: sil:SPOA0362 27kDa outer membrane protein. | PFAM: DSBA oxidoreductase; KEGG: sit:TM1040_2643 thiol:disulfide interchange protein, DsbA family. | 0.705 |
Pden_3792 | Pden_3793 | Pden_3792 | Pden_3793 | PFAM: DSBA oxidoreductase; KEGG: sil:SPOA0362 27kDa outer membrane protein. | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase; KEGG: bmb:BruAb2_0689 AlkB, alkylated DNA repair protein. | 0.555 |
Pden_3792 | Pden_3866 | Pden_3792 | Pden_3866 | PFAM: DSBA oxidoreductase; KEGG: sil:SPOA0362 27kDa outer membrane protein. | PFAM: Disulphide bond formation protein DsbB; KEGG: sil:SPO2117 disulfide bond formation protein, DsbB family. | 0.573 |
Pden_3792 | polA | Pden_3792 | Pden_1853 | PFAM: DSBA oxidoreductase; KEGG: sil:SPOA0362 27kDa outer membrane protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.487 |
Pden_3793 | Pden_3792 | Pden_3793 | Pden_3792 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase; KEGG: bmb:BruAb2_0689 AlkB, alkylated DNA repair protein. | PFAM: DSBA oxidoreductase; KEGG: sil:SPOA0362 27kDa outer membrane protein. | 0.555 |
Pden_3866 | Pden_2095 | Pden_3866 | Pden_2095 | PFAM: Disulphide bond formation protein DsbB; KEGG: sil:SPO2117 disulfide bond formation protein, DsbB family. | PFAM: DSBA oxidoreductase; KEGG: sit:TM1040_2643 thiol:disulfide interchange protein, DsbA family. | 0.626 |
Pden_3866 | Pden_3792 | Pden_3866 | Pden_3792 | PFAM: Disulphide bond formation protein DsbB; KEGG: sil:SPO2117 disulfide bond formation protein, DsbB family. | PFAM: DSBA oxidoreductase; KEGG: sil:SPOA0362 27kDa outer membrane protein. | 0.573 |
Pden_3866 | polA | Pden_3866 | Pden_1853 | PFAM: Disulphide bond formation protein DsbB; KEGG: sil:SPO2117 disulfide bond formation protein, DsbB family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.442 |
polA | Pden_2095 | Pden_1853 | Pden_2095 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | PFAM: DSBA oxidoreductase; KEGG: sit:TM1040_2643 thiol:disulfide interchange protein, DsbA family. | 0.487 |
polA | Pden_3792 | Pden_1853 | Pden_3792 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | PFAM: DSBA oxidoreductase; KEGG: sil:SPOA0362 27kDa outer membrane protein. | 0.487 |
polA | Pden_3866 | Pden_1853 | Pden_3866 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | PFAM: Disulphide bond formation protein DsbB; KEGG: sil:SPO2117 disulfide bond formation protein, DsbB family. | 0.442 |