STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmuVABC transporter related protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (257 aa)    
Predicted Functional Partners:
Pden_4203
PFAM: periplasmic binding protein; KEGG: rde:RD1_4189 hemin ABC transporter, periplasmic hemin-binding protein.
 
 
 0.996
Pden_4202
PFAM: Haemin-degrading family protein; KEGG: jan:Jann_2133 haemin-degrading.
  
 0.986
Pden_4204
PFAM: transport system permease protein; KEGG: jan:Jann_2135 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.976
Pden_4201
TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: jan:Jann_2132 TonB-dependent haem/haemoglobin receptor.
 
  
 0.896
Pden_3533
PFAM: transport system permease protein; KEGG: pfl:PFL_3624 ferric vibriobactin ABC transporter, permease protein VC0777; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.812
Pden_1169
PFAM: transport system permease protein; KEGG: eca:ECA3095 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.794
Pden_3011
PFAM: transport system permease protein; KEGG: hch:HCH_03457 ABC-type enterobactin transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.792
Pden_4384
PFAM: transport system permease protein; KEGG: rsp:RSP_2404 ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.790
Pden_0865
PFAM: transport system permease protein; ABC-3 protein; KEGG: rpd:RPD_2479 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.774
Pden_3031
PFAM: transport system permease protein; KEGG: nha:Nham_0954 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.771
Your Current Organism:
Paracoccus denitrificans
NCBI taxonomy Id: 318586
Other names: P. denitrificans PD1222, Paracoccus denitrificans PD1222
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