STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pden_4391Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2667 ABC sugar (glycerol) transporter, ATPase subunit; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily. (367 aa)    
Predicted Functional Partners:
Pden_4389
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2665 ABC sugar (glycerol) transporter, inner membrane subunit; TC 3.A.1.1.-.
 
 0.993
Pden_4390
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2666 ABC sugar (glycerol) transporter, inner membrane subunit; TC 3.A.1.1.-.
 
 0.993
Pden_4387
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; KEGG: rsp:RSP_2663 ABC sugar (glycerol) transporter, periplasmic binding protein; TC 3.A.1.1.-.
 
 0.982
Pden_4392
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_2669 ABC sugar (glycerol) transporter, ATPase subunit; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
  
 
0.966
Pden_4388
KEGG: rsp:RSP_2664 hypothetical protein.
 
    0.884
Pden_4393
PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_2670 putative FAD-dependent glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.765
Pden_1049
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0952 binding-protein-dependent transport systems inner membrane component; TC 3.A.1.1.-.
 
 0.703
Pden_1048
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll2730 probable ABC transporter permease protein; TC 3.A.1.1.-.
 
 
 0.620
Pden_4440
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0306 sugar ABC transporter, permease protein; TC 3.A.1.1.-.
 
 0.554
Pden_4441
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20326 probable trehalosemaltose transporter permease protein; TC 3.A.1.1.-.
 
 
 0.541
Your Current Organism:
Paracoccus denitrificans
NCBI taxonomy Id: 318586
Other names: P. denitrificans PD1222, Paracoccus denitrificans PD1222
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