Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pden_4440PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0306 sugar ABC transporter, permease protein; TC 3.A.1.1.-. (277 aa)    
Predicted Functional Partners:
Pden_4441
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20326 probable trehalosemaltose transporter permease protein; TC 3.A.1.1.-.
 
 0.994
Pden_4439
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PF00207 trehalosemaltose ABC transporter, ATP-binding protein; TC 3.A.1.1.-.
 
 0.993
Pden_4442
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: sme:SMb20325 probable trehalosemaltose-binding protein; TC 3.A.1.1.-.
 
 0.988
Pden_2469
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc02869 putative ATP-binding ABC transporter protein; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
 0.971
Pden_4178
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sit:TM1040_0428 ABC transporter related.
 
 0.968
Pden_1048
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll2730 probable ABC transporter permease protein; TC 3.A.1.1.-.
 
 
 0.879
ugpC
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 
 0.853
Pden_1087
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mlo:mlr6654 ABC transporter, ATP-binding component; TC 3.A.1.1.-.
 
 
 0.850
Pden_1050
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sth:STH1782 sugar ABC transportor ATP-binding protein; TC 3.A.1.1.-.
 
 
 0.830
Pden_3407
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc04393 putative ATP-binding ABC transporter protein; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
 
 0.817
Your Current Organism:
Paracoccus denitrificans
NCBI taxonomy Id: 318586
Other names: P. denitrificans PD1222, Paracoccus denitrificans PD1222
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