STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP75388.1PFAM: aminoglycoside phosphotransferase; KEGG: son:SO2712 hypothetical protein. (367 aa)    
Predicted Functional Partners:
ABP75654.1
PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: shm:Shewmr7_2087 hypothetical protein.
  
     0.769
ABP75020.1
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: shm:Shewmr7_2781 TPR repeat-containing protein.
  
     0.766
ABP75107.1
KEGG: son:SO1659 decaheme cytochrome c.
  
     0.766
ABP77068.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain protein; KEGG: shm:Shewmr7_3532 transcriptional regulator, CadC.
  
     0.766
ABP77412.1
PFAM: Sporulation domain protein; KEGG: son:SO0288 DamX domain protein.
  
     0.763
ABP74356.1
KEGG: son:SO1428 outer membrane protein.
  
     0.762
ABP76537.1
KEGG: son:SO1222 membrane protein.
  
     0.760
ABP74662.1
KEGG: son:SO1096 hypothetical protein.
  
     0.759
ABP75360.1
KEGG: shm:Shewmr7_1610 hypothetical protein.
  
     0.759
ABP73798.1
KEGG: she:Shewmr4_0079 MORN variant repeat protein.
  
     0.757
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.