STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP75713.1PFAM: Resolvase, N-terminal domain; KEGG: sfr:Sfri_3477 resolvase, N-terminal domain protein. (206 aa)    
Predicted Functional Partners:
ABP76330.1
PFAM: bacteriophage replication gene A; KEGG: vvy:VV1773 A protein.
   
    0.797
ABP75710.1
PFAM: transposase Tn3 family protein; KEGG: sfr:Sfri_3470 transposase Tn3 family protein.
 
     0.760
ABP75684.1
PFAM: transposase Tn3 family protein; KEGG: sfr:Sfri_3470 transposase Tn3 family protein.
 
     0.565
ABP73928.1
PFAM: transposase Tn3 family protein; KEGG: sfr:Sfri_3470 transposase Tn3 family protein.
 
     0.564
ABP75711.1
PFAM: plasmid stabilization system; KEGG: sfr:Sfri_3471 plasmid stabilization system.
       0.522
ABP75712.1
TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: sfr:Sfri_3472 prevent-host-death family protein.
       0.514
ABP75709.1
PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: shm:Shewmr7_1971 response regulator receiver modulated metal dependent phosphohydrolase.
       0.410
ABP76602.1
KEGG: son:SOA0063 ISSod8, transposase.
 
     0.407
ABP76771.1
KEGG: son:SO0975 hypothetical protein.
   
    0.405
ABP77539.1
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: mhu:Mhun_0868 putative cytochrome c biogenesis protein.
   
    0.405
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.