STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP75772.1PFAM: glycoside hydrolase, family 43; KEGG: shm:Shewmr7_1980 arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family. (357 aa)    
Predicted Functional Partners:
ABP75771.1
Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase, family 43; KEGG: she:Shewmr4_1996 glycoside hydrolase, family 43.
 
   
 0.950
ABP75774.1
Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase, family 43; KEGG: sde:Sde_0777 ribosomal protein L11 methyltransferase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.868
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.785
ABP75776.1
Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase, family 43; KEGG: shm:Shewmr7_1984 alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.779
ABP75773.1
TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: she:Shewmr4_1994 sugar (glycoside-pentoside-hexuronide) transporter.
 
  
 0.727
ABP75789.1
TIGRFAM: L-ribulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: shm:Shewmr7_1997 L-ribulokinase.
 
    0.709
ABP75769.1
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: shm:Shewmr7_1977 TonB-dependent receptor.
 
     0.698
ABP75788.1
L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: shm:Shewmr7_1996 L-ribulose-5-phosphate 4-epimerase.
 
  
 0.598
ABP74808.1
TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3503 glucose/galactose transporter.
  
     0.447
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.