STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP76243.1PFAM: protein of unknown function DUF1017; KEGG: shm:Shewmr7_1406 protein of unknown function DUF1017. (261 aa)    
Predicted Functional Partners:
ABP76242.1
KEGG: she:Shewmr4_1342 lipoprotein, putative.
 
  
 0.971
ABP76244.1
PFAM: protein of unknown function DUF940, membrane lipoprotein putative; KEGG: son:SO3159 hypothetical protein.
 
    0.969
ABP74100.1
PFAM: protein of unknown function, Spy-related; KEGG: she:Shewmr4_0253 protein of unknown function, Spy-related.
  
     0.729
ABP77015.1
KEGG: son:SO0573 hypothetical protein.
  
     0.699
ABP75654.1
PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: shm:Shewmr7_2087 hypothetical protein.
  
     0.668
ABP75908.1
KEGG: she:Shewmr4_1791 hypothetical protein.
  
     0.645
ABP76136.1
PFAM: ferric iron reductase; KEGG: son:SO3034 ferric iron reductase protein, putative.
  
     0.645
ABP73798.1
KEGG: she:Shewmr4_0079 MORN variant repeat protein.
  
     0.634
ABP74662.1
KEGG: son:SO1096 hypothetical protein.
  
     0.625
ABP75882.1
KEGG: son:SO1425 hypothetical protein.
  
     0.614
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.