STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP76628.1KEGG: psb:Psyr_3724 hypothetical protein. (435 aa)    
Predicted Functional Partners:
ABP76627.1
PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: psb:Psyr_3725 ATPas.
 
 
 0.998
ABP76626.1
PFAM: restriction modification system DNA specificity domain; KEGG: pol:Bpro_1941 restriction endonuclease S subunits-like.
  
  
 0.775
ABP76625.1
PFAM: N-6 DNA methylase; KEGG: bxe:Bxe_A0224 type I restriction-modification system, M subunit.
       0.748
ABP76629.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.472
ABP75292.1
PFAM: protein of unknown function DUF1289; KEGG: son:SO2792 hypothetical protein.
  
     0.457
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.